Pfam 22.0 :: Radial_spoke_3
Description of the Radial_spoke_3 family
Radial_spoke <-- --> Radical_SAM

Radial_spoke_3


Accession number: PF06098
Radial spoke protein 3

This family consists of several radial spoke protein 3 (RSP3) sequences. Eukaryotic cilia and flagella present in diverse types of cells perform motile, sensory, and developmental functions in organisms from protists to humans. They are centred by precisely organised, microtubule-based structures, the axonemes. The axoneme consists of two central singlet microtubules, called the central pair, and nine outer doublet microtubules. These structures are well-conserved during evolution. The outer doublet microtubules, each composed of A and B sub-fibres, are connected to each other by nexin links, while the central pair is held at the centre of the axoneme by radial spokes. The radial spokes are T-shaped structures extending from the A-tubule of each outer doublet microtubule to the centre of the axoneme. Radial spoke protein 3 (RSP3), is present at the proximal end of the spoke stalk and helps in anchoring the radial spoke to the outer doublet. It is thought that radial spokes regulate the activity of inner arm dynein through protein phosphorylation and dephosphorylation [1].

Description

This family consists of several radial spoke protein 3 (RSP3) sequences. Eukaryotic cilia and flagella present in diverse types of cells perform motile, sensory, and developmental functions in organisms from protists to humans. They are centred by precisely organised, microtubule-based structures, the axonemes. The axoneme consists of two central singlet microtubules, called the central pair, and nine outer doublet microtubules. These structures are well conserved during evolution. The outer doublet microtubules, each composed of A and B sub-fibres, are connected to each other by nexin links, while the central pair is held at the centre of the axoneme by radial spokes. The radial spokes are T-shaped structures extending from the A-tubule of each outer doublet microtubule to the centre of the axoneme. Radial spoke protein 3 (RSP3), is present at the proximal end of the spoke stalk and helps in anchoring the radial spoke to the outer doublet. It is thought that radial spoke! s regulate the activity of inner arm dynein through protein phosphorylation and dephosphorylation PUBMED:12589069.


Description text from InterPro entry IPR009290

Sequence information


Alignment

Seed (3)  Full (45)
Format:

Visualize domain structures

Seed (3)  Full (45)
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Species distribution

Tree depth:

Literature References

[1]
Identification of a Novel Leucine-rich Repeat Protein as a Component of Flagellar Radial Spoke in the Ascidian Ciona intestinalis.
Padma P, Satouh Y, Wakabayashi K, Hozumi A, Ushimaru Y, Kamiya R, Inaba K;
Mol Biol Cell 2003;14:774-785.

Database References

INTERPRO IPR009290

HMMER build information

Pfam_ls [download HMM] Pfam_fs [download HMM]
Gathering cutoff 25.00 25.00 25.00 25.00
Trusted cutoff 38.30 38.30 39.70 39.70
Noise cutoff 9.20 9.20 12.30 21.70
Build method of HMM hmmbuild -F HMM_ls SEED
hmmcalibrate --seed 0 HMM_ls
hmmbuild -f -F HMM_fs SEED
hmmcalibrate --seed 0 HMM_fs

Pfam specific information

Author of entryMoxon SJ
Type definitionFamily
Source of seed membersPfam-B_9453 (release 9.0)