Pfam 22.0 :: Kazal_1
Description of the Kazal_1 family
KapB <-- --> Kazal_2

Kazal_1


Accession number: PF00050
Kazal-type serine protease inhibitor domain

Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Alignment also includes a single domain from transporters in the OATP/PGT family P46721.

Description

Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen.

This family of Kazal inhibitors, belongs to MEROPS inhibitor family I1, clan IA. They inhibit serine peptidases of the S1 family () PUBMED:14705960. The members are primarily metazoan, but includes exceptions in the alveolata (apicomplexa), stramenopiles, higher plants and bacteria.

Kazal inhibitors, which inhibit a number of serine proteases (such as trypsin and elastase), belong to family of proteins that includes pancreatic secretory trypsin inhibitor; avian ovomucoid; acrosin inhibitor; and elastase inhibitor. These proteins contain between 1 and 7 Kazal-type inhibitor repeats PUBMED:6699915, PUBMED:3828298.

The structure of the Kazal repeat includes a large quantity of extended chain, 2 short alpha-helices and a 3-stranded anti-parallel beta sheet PUBMED:6699915.The inhibitor makes 11 contacts with its enzyme substrate: unusually, 8 of these important residues are hypervariable PUBMED:3828298. Altering the enzyme-contact residues, and especially that of the active site bond, affects the the strength of inhibition and specificity of the inhibitor for particular serine proteases PUBMED:3828298, PUBMED:7046785. The presence of this Pfam domain is usually indicative of serine protease inhibitors, however, Kazal-like domains are also seen in the extracellular part of agrins which are not known to be proteinase inhibitors.


Description text from InterPro entry IPR002350

Sequence information


Alignment

Seed (51)  Full (716)
Format:

Visualize domain structures

Seed (51)  Full (716)
display per page.

Species distribution

Tree depth:

Database References

HOMSTRAD kazal
PFAMB
The following Pfam-B families contain sequences that according to Prodom are members of this Pfam-A family.
PB170654 PB176136
PROSITE PDOC00254
SCOP 3sgb (family)
INTERPRO IPR002350

HMMER build information

Pfam_ls [download HMM] Pfam_fs [download HMM]
Gathering cutoff 3.00 3.00 20.00 20.00
Trusted cutoff 3.50 3.00 20.00 20.00
Noise cutoff 2.50 2.80 19.60 19.90
Build method of HMM hmmbuild -F HMM_ls SEED
hmmcalibrate --seed 0 HMM_ls
hmmbuild -f -F HMM_fs SEED
hmmcalibrate --seed 0 HMM_fs

Pfam specific information

Author of entryEddy SR
Type definitionDomain
Source of seed membersProsite