Pfam 22.0 :: B-block_TFIIIC
Description of the B-block_TFIIIC family
B <-- --> B1

B-block_TFIIIC


Accession number: PF04182
B-block binding subunit of TFIIIC

Yeast transcription factor IIIC (TFIIIC) is a multi-subunit protein complex that interacts with two control elements of class III promoters called the A and B blocks. This family represents the subunit within TFIIIC involved in B-block binding [1].

Description

Yeast transcription factor IIIC (TFIIIC) is a multisubunit protein complex that interacts with two control elements of class III promoters called the A and B blocks. This family represents the subunit within TFIIIC involved in B-block binding PUBMED:1279682.
Description text from InterPro entry IPR007309

Sequence information


Alignment

Seed (2)  Full (14)
Format:

Visualize domain structures

Seed (2)  Full (14)
display per page.

Species distribution

Tree depth:

Literature References

[1]
TFC3: gene encoding the B-block binding subunit of the yeast transcription factor IIIC.
Lefebvre O, Carles C, Conesa C, Swanson RN, Bouet F, Riva M, Sentenac A;
Proc Natl Acad Sci U S A 1992;89:10512-10516.

Database References

INTERPRO IPR007309

HMMER build information

Pfam_ls [download HMM] Pfam_fs [download HMM]
Gathering cutoff 25.00 25.00 25.00 25.00
Trusted cutoff 77.10 77.10 31.40 26.40
Noise cutoff -2.60 -2.60 23.90 24.90
Build method of HMM hmmbuild -F HMM_ls SEED
hmmcalibrate --seed 0 HMM_ls
 hmmbuild -f -F HMM_fs SEED
hmmcalibrate --seed 0 HMM_fs

Pfam specific information

Author of entryWood V, Finn RD
Type definitionFamily
Source of seed membersPfam-B_68239 (release 7.3);