Pfam 22.0 :: Tagatose_6_P_K
Description of the Tagatose_6_P_K family
Taeniidae_ag <-- --> Tail_P2_I

Tagatose_6_P_K


Accession number: PF08013
Tagatose 6 phosphate kinase

Proteins in this family are tagatose 6 phosphate kinases.

Description

Escherichia coli and other enteric bacteria contain two closely related D-tagatose 1,6-bisphosphate (TagBP)-specific aldolases involved in catabolism of galactitol (genes gatY gatZ) and of N-acetyl-galactosamine and D-galactosamine (genes kbaY, kbaZ, also called agaY, agaZ). The catalytic subunits GatY/KbaY alone are sufficient to show aldolase activity and contain most or all of the residues that have been identified as essential in substrate/product recognition and catalysis for class II aldolases PUBMED:11976750, PUBMED:8955298. However, these aldolases differ from other Class II aldolases (which are homodimeric enzymes) in that they require subunits GatZ/KbaZ for full activity and for good in vivo and in vitro stability. The Z subunits alone do not show any aldolase activity PUBMED:11976750. It should be noted that the previous suggestion of a tagatose 6P-kinase function for AgaZ PUBMED:8932697 and other members of this family turned out to be erroneous PUBMED:10931310, PUBMED:11976750.


Description text from InterPro entry IPR012062

Sequence information


Alignment

Seed (11)  Full (82)
Format:

Visualize domain structures

Seed (11)  Full (82)
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Species distribution

Tree depth:

Literature References

[1]
Molecular cloning, characterization, and nucleotide sequence of the tagatose 6-phosphate pathway gene cluster of the lactose operon of Lactococcus lactis.
van Rooijen RJ, van Schalkwijk S, de Vos WM;
J Biol Chem 1991;266:7176-7181.

Database References

INTERPRO IPR012062

HMMER build information

Pfam_ls [download HMM] Pfam_fs [download HMM]
Gathering cutoff 0.00 0.00 25.00 25.00
Trusted cutoff 268.20 268.20 53.80 53.80
Noise cutoff -97.50 -97.50 11.80 11.80
Build method of HMM hmmbuild -F HMM_ls SEED
hmmcalibrate --seed 0 HMM_ls
hmmbuild -f -F HMM_fs SEED
hmmcalibrate --seed 0 HMM_fs

Pfam specific information

Author of entryMistry J
Type definitionFamily
Source of seed membersPfam-B_5149 (release 16.0)