Pfam 22.0 :: ECH
Description of the ECH family
EB_dh <-- --> ECM1

ECH


Accession number: PF00378
Enoyl-CoA hydratase/isomerase family

This family contains a diverse set of enzymes including: Enoyl-CoA hydratase (Q13011). Napthoate synthase (P27290). Carnitate racemase (P31551). 3-hydoxybutyryl-CoA dehydratase (P52046). Dodecanoyl-CoA delta-isomerase (P42126).

Description

Enoyl-CoA hydratase () (ECH) PUBMED:2806264 and 3-2trans-enoyl-CoA isomerase () (ECI) PUBMED:1958319 are two enzymes involved in fatty acid metabolism. ECH catalyzes the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA and ECI shifts the 3- double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position.

Most eukaryotic cells have two fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In mitochondria, ECH and ECI are separate yet structurally related monofunctional enzymes. Peroxisomes contain a trifunctional enzyme PUBMED:2303409 consisting of an N-terminal domain that bears both ECH and ECI activity, and a C-terminal domain responsible for 3-hydroxyacyl-CoA dehydrogenase (HCDH) activity.

In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA), ECH and ECI are also part of a multifunctional enzyme which contains both a HCDH and a 3-hydroxybutyryl-CoA epimerase domain PUBMED:2204034.

A number of other proteins have been found to be evolutionary related to the ECH/ECI enzymes or domains:

  • 3-hydroxbutyryl-coa dehydratase () (crotonase), a bacterial enzyme involved in the butyrate/butanol-producing pathway.
  • Naphthoate synthase () (DHNA synthetase) (gene menB) PUBMED:1629163, a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2). DHNA synthetase converts O-succinyl-benzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoic acid (DHNA).
  • 4-chlorobenzoate dehalogenase () PUBMED:1351742, a Pseudomonas enzyme which catalyzes the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA.
  • A Rhodobacter capsulatus protein of unknown function (ORF257) PUBMED:1743516.
  • Bacillus subtilis putative polyketide biosynthesis proteins pksH and pksI.
  • E. coli carnitine racemase (gene caiD) PUBMED:7815937.
  • E. coli hypothetical protein ygfG.
  • Yeast hypothetical protein YDR036c.


Description text from InterPro entry IPR001753

Sequence information


Alignment

Seed (13)  Full (4872)
Format:

Visualize domain structures

Seed (13)  Full (4872)
display per page.

Species distribution

Tree depth:

Database References

HOMSTRAD ech
PFAMB
The following Pfam-B families contain sequences that according to Prodom are members of this Pfam-A family.
PB007018 PB106724 PB170428 PB178851 PB182214
PROSITE PDOC00150
SCOP 1dub (family)
INTERPRO IPR001753

HMMER build information

Pfam_ls [download HMM] Pfam_fs [download HMM]
Gathering cutoff -57.60 -57.60 14.40 14.40
Trusted cutoff -57.50 -57.50 14.40 14.40
Noise cutoff -58.10 -58.10 14.30 14.30
Build method of HMM hmmbuild -F HMM_ls SEED
hmmcalibrate --seed 0 HMM_ls
hmmbuild -f -F HMM_fs SEED
hmmcalibrate --seed 0 HMM_fs

Pfam specific information

Author of entryFinn RD
Type definitionFamily
Source of seed membersProsite