Pfam 22.0 :: Browse Families

Pfam 22.0 :: Browse Families - Y
Browse available alignments and models

Browse Pfam

Available sections: Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z Top twenty families

Name	acc number	#seed	#full	av. len	av. %id	structure	Description
Y
YABBY	PF04690	6	74	146 aa	49%		YABBY protein
YabP	PF07873	7	41	80 aa	45%		YabP family
YadA	PF03895	12	289	77 aa	33%		YadA-like C-terminal region
YaeQ	PF07152	9	146	178 aa	44%		YaeQ protein
YagB_YeeU_YfjZ	PF06154	4	49	101 aa	75%		YagB/YeeU/YfjZ family
YajC	PF02699	10	493	83 aa	34%		Preprotein translocase subunit
YbaK	PF04073	25	1029	137 aa	21%	1dbx	YbaK / prolyl-tRNA synthetases associated domain
YbbR	PF07949	64	363	82 aa	19%		YbbR-like protein
YbgT_YccB	PF08173	12	109	28 aa	58%		Membrane bound YbgT-like protein
YcaO	PF02624	27	216	365 aa	24%		YcaO-like family
YcbB	PF08664	13	39	133 aa	43%		YcbB domain
YccV-like	PF08755	24	122	94 aa	37%		Hemimethylated DNA-binding protein YccV like
YceI	PF04264	138	589	163 aa	25%	1uf6	YceI-like domain
Ycf1	PF05758	8	96	567 aa	47%		Ycf1
Ycf4	PF02392	14	138	178 aa	55%		Ycf4
Ycf66_N	PF07444	6	41	81 aa	60%		Ycf66 protein N-terminus
Ycf9	PF01737	9	196	57 aa	73%		YCF9
YcfA	PF07927	39	203	54 aa	30%		YcfA-like protein
YcgL	PF05166	51	105	74 aa	48%		YcgL domain
YcgR	PF07317	7	61	107 aa	34%		YcgR protein
YCII	PF03795	20	403	82 aa	29%	1mwq	YCII-related domain
Ydc2-catalyt	PF09159	9	20	238 aa	28%	1kcf	Mitochondrial resolvase Ydc2, catalytic
YDG_SRA	PF02182	4	97	154 aa	41%		YDG/SRA domain
ydhR	PF08803	11	41	93 aa	51%		Putative mono-oxygenase ydhR
YdjC	PF04794	9	195	229 aa	29%		YdjC-like protein
Yeast-kill-tox	PF09207	2	2	86 aa	88%	1wkt	Yeast killer toxin
YEATS	PF03366	24	134	83 aa	35%		YEATS family
YebG	PF07130	5	72	73 aa	49%		YebG protein
YecM	PF06185	6	60	181 aa	45%	1k4n	YecM protein
YfaZ	PF07437	3	45	177 aa	36%		YfaZ precursor
YfbU	PF03887	4	46	166 aa	58%		YfbU domain
YfcL	PF08891	13	59	86 aa	48%		YfcL protein
YfhO	PF09586	44	120	623 aa	24%		Bacterial membrane protein YfhO
YfkB	PF08756	10	34	153 aa	67%		YfkB-like domain
YgbB	PF02542	12	471	156 aa	47%	1iv1	YgbB family
YGGT	PF02325	23	578	81 aa	27%		YGGT family
YhhN	PF07947	22	169	183 aa	26%		YhhN-like protein
YhjQ	PF06564	2	19	182 aa	66%		YhjQ protein
YHS	PF04945	24	331	41 aa	32%		YHS domain
YiaAB	PF05360	19	144	52 aa	32%		yiaA/B two helix domain
YibE_F	PF07907	25	131	235 aa	27%		YibE/F-like protein
YicC_N	PF03755	14	315	155 aa	30%		YicC-like family, N-terminal region
YIF1	PF03878	6	85	226 aa	36%		YIF1
YiiD_Cterm	PF09500	36	88	82 aa	37%		Putative thioesterase (yiiD_Cterm)
Yip1	PF04893	45	250	151 aa	22%		Yip1 domain
Yippee	PF03226	7	154	96 aa	49%		Yippee putative zinc-binding protein
YjcQ	PF09639	8	9	93 aa	34%		YjcQ protein
YjeF_N	PF03853	27	521	166 aa	30%	1jzt	YjeF-related protein N-terminus
YjgP_YjgQ	PF03739	36	728	352 aa	17%		Predicted permease YjgP/YjgQ family
Ykof	PF07615	6	11	78 aa	33%		YKOF-related Family
YL1	PF05764	17	56	221 aa	28%		YL1 nuclear protein
YL1_C	PF08265	28	89	29 aa	42%		YL1 nuclear protein C-terminal domain
YLP	PF02757	26	351	9 aa	50%		YLP motif
YMF19	PF02326	24	143	77 aa	36%		Plant ATP synthase F0
YodA	PF09223	22	78	175 aa	54%	1oej	YodA
YolD	PF08863	28	84	89 aa	25%		YolD-like protein
YonK	PF09642	2	2	62 aa	100%		YonK protein
YopD	PF05844	2	21	296 aa	49%	1kdl	YopD protein
YopE	PF03545	4	28	69 aa	51%	1g4w	Yersinia virulence determinant (YopE)
YopE_N	PF09020	2	8	126 aa	95%		YopE, N terminal
YopH_N	PF09013	4	19	115 aa	59%		YopH, N-terminal
YopJ	PF03421	17	66	173 aa	29%		YopJ Serine/Threonine acetyltransferase
YopR_core	PF09025	8	18	140 aa	43%		YopR Core
Yopt	PF09467	2	2	71 aa	100%		Hypothetical protein Yopt
YopX	PF09643	42	94	117 aa	31%		YopX protein
YorP	PF09629	2	2	71 aa	100%		YorP protein
Yos1	PF08571	15	39	75 aa	44%		Yos1-like
YpM	PF09144	2	3	116 aa	88%	1pm4	Yersinia pseudotuberculosis mitogen
Yqai	PF09466	2	2	67 aa	42%		Hypothetical protein Yqai
YqaJ	PF09588	64	174	139 aa	23%		YqaJ viral recombinase family
YqcI_YcgG	PF08892	13	40	219 aa	31%		YqcI/YcgG family
YqeY	PF09424	43	360	141 aa	38%	1ng5	Yqey-like protein
YqfD	PF06898	8	46	378 aa	32%		Putative stage IV sporulation protein YqfD
YscI_HrpB_dom	PF09525	22	82	38 aa	33%		Bacterial type III secretion system protein (yscI_hrpB_dom)
YscJ_FliF	PF01514	21	496	202 aa	27%		Secretory protein of YscJ/FliF family
YscJ_FliF_C	PF08345	57	332	169 aa	29%		Flagellar M-ring protein C-terminal
YscK	PF06578	3	18	206 aa	50%		YOP proteins translocation protein K (YscK)
YscO	PF07321	3	29	151 aa	37%		Type III secretion protein YscO
YscW	PF09619	6	13	123 aa	46%		Type III secretion system lipoprotein chaperone (YscW)
YSIRK_signal	PF04650	66	746	26 aa	41%		YSIRK type signal peptide
YtfJ_HI0045	PF09695	13	56	172 aa	53%		Bacterial protein of unknown function (YtfJ_HI0045)
YTH	PF04146	16	190	86 aa	44%		YT521-B-like family
YTV	PF07639	4	14	43 aa	44%		YTV
YtxC	PF08812	18	39	217 aa	29%		YtxC-like family
YugN	PF08868	15	34	123 aa	41%		YugN-like family
YukD	PF08817	9	33	76 aa	46%		YukD
YvfG	PF09628	2	3	67 aa	55%		YvfG protein
YwhD	PF08741	8	33	164 aa	66%		YwhD family
YycH	PF07435	7	63	414 aa	25%	1fgt	YycH protein
YycI	PF09648	35	65	224 aa	26%	2o3o	YycH protein
Y_phosphatase	PF00102	123	1481	209 aa	32%	1ypt	Protein-tyrosine phosphatase
Y_phosphatase2	PF03162	8	129	156 aa	32%		Tyrosine phosphatase family
Y_Y_Y	PF07495	79	348	61 aa	23%		Y_Y_Y domain

Available sections: Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z Top twenty families