Pfam 22.0 :: Browse Families (KISTI)

Pfam 22.0 :: Browse Families
Browse available alignments and models

Pfam 22.0: available alignments and models

The families are grouped under the first letter of their name, regardless of case.
All families starting with a number are found in 'Numbers'.

Name	acc number	#seed	#full	av. len	av. %id	structure	Description
Top twenty families
GP120	PF00516	24	68119	175 aa	55%	1gc1	Envelope glycoprotein GP120
LRR_1	PF00560	2453	59894	22 aa	27%	1bnh	Leucine Rich Repeat
RVT_1	PF00078	158	57960	167 aa	71%	1hmv	Reverse transcriptase (RNA-dependent DNA polymerase)
Ank	PF00023	1163	56928	30 aa	28%	1awc	Ankyrin repeat
zf-C2H2	PF00096	196	48700	23 aa	36%	1zaa	Zinc finger, C2H2 type
ABC_tran	PF00005	64	47590	185 aa	26%	1b0u	ABC transporter
RVP	PF00077	50	46483	93 aa	85%	1ida	Retroviral aspartyl protease
COX1	PF00115	23	46020	232 aa	50%	1occ	Cytochrome C and Quinol oxidase polypeptide I
Cytochrom_B_N	PF00033	8	43650	153 aa	69%	3bcc	Cytochrome b(N-terminal)/b6/petB
WD40	PF00400	1866	37671	39 aa	23%	1gp2	WD domain, G-beta repeat
Oxidored_q1	PF00361	33	30982	213 aa	28%		NADH-Ubiquinone/plastoquinone (complex I), various chains
TPR_1	PF00515	562	29162	33 aa	19%	1a17	Tetratricopeptide repeat
Cytochrom_B_C	PF00032	9	27866	88 aa	75%	1bcc	Cytochrome b(C-terminal)/b6/petD
Pkinase	PF00069	54	25281	224 aa	24%	1apm	Protein kinase domain
HATPase_c	PF02518	662	24556	110 aa	22%	1ei1	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response_reg	PF00072	57	24254	110 aa	26%	3chy	Response regulator receiver domain
Hexapep	PF00132	468	23812	17 aa	21%	1lxa	Bacterial transferase hexapeptide (three repeats)
MFS_1	PF07690	198	23027	349 aa	13%		Major Facilitator Superfamily
HCV_NS1	PF01560	10	22273	87 aa	55%		Hepatitis C virus non-structural protein E2/NS1
RVT_thumb	PF06817	41	21983	57 aa	89%	1mu2	Reverse transcriptase thumb domain

9318 families.